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Modified protocol for multiple rounds of PolyA selection

Aliquot and Wash magnetic beads

  • Wash 2µl MB twice with 50µl BW.

  • Withdraw and discard supernatant.

  • Resuspend washed beads in 5µl HYB.

Denature RNA

  • Prepare total RNA in a volume of 15µl.

  • Incubate for 1min at 60°C and hold at 25°C.

Hybridize Poly(A) RNA

  • Add denaturated RNA (15µl) to 5µl washed beads.

  • Incubate for 20 min at 25°C / 1,250 rpm.

  • Wash 2X for 5 min at 25°C / 1,250 rpm with BW.

  • Withdraw and discard supernatant.

Elute and Re-bing Poly(A) RNA

  • Add 15µl H20.

  • Incubate for 1 min at 70°C.

  • Add 5µl HYB to re-bind the polyA+ RNA to the beads.

  • Incubate for 20 min at 25°C / 1,250 rpm .

  • Wash 2X for 5 min at 25°C / 1,250 rpm with BW.

  • Withdraw and discard supernatant.

Elute Poly(A) RNA

  • Add 25µl H20.

NOTE: When working with input amount <500ng or for CORALL lib prep, only add 12µl of H20.

  • Incubate for 1 min at 70°C.

  • Immediately place on magnet for 5 min or until supernatant is clear.

  • Transfer the clear supernatant into a fresh tube.

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