How can I analyze my CORALL V2 Data?
Our CORALL mRNA-seq, Total, and FFPE kits include a voucher code for free data analysis on our web-based platform Kangooroo. All CORALL data (mRNA, Total, and FFPE) use the same standard CORALL pipeline on Kangooroo.
For more information about our Kangooroo platform, visit our website Lexogen - Kangooroo and check our Kangooroo Data AnalysisFAQs !
If additional codes are needed, please contact sales@lexogen.com.
NOTE: Our CORALL pipeline is compatible with both single and paired-end data.
If you prefer to analyze your CORALL data on your own, please visit our Lexogen Tools GitHub page for complete data analysis pipeline and helpful tips to maximize your data analysis! Please note that the workflow may need to be adjusted, depending on the goal of the sequencing experiment.
Key steps of the general workflow to use to analyze CORALL data:
CORALL |
|---|
UMI extraction |
Trimming |
Mapping |
UMI collapsing |
Transcript isoform quantification (Mix2) |
Gene Read counting |
Differential Expression Analysis |